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ASHGI's IDASH Pedigree Analysis Service


This service is an outgrowth of the private pedigree analysis service ASHGI President, C.A. Sharp, has offered for many years. CA has been integral to the development of this ASHGI/IDASH service and oversees its operation. A brief overview of the program and how to participate follows. For the reader who would like a more in-depth history and discussion of how to apply the process to a breeding program click HERE.

DATA SOURCES - While some of the background information has been gleaned from open disease registries in the US and Europe, much of it was supplied by owners and breeders and was provided under conditions of strict confidentiality. ASHGI will not provide information about specific dogs in a pedigree. Since we are largely dependent on voluntary submission of information, our database cannot reflect every incidence of a given trait. Risk scores may therefore be understated.

 

DISEASES AND HEREDITARY FAULTS - For detailed information about most of the genetic issues in the Australian Shepherd breed, please refer to our Genetics Information section and links page. Traits currently being tracked are:

  • Allergies
  • Autoimmune Disease
  • Bad Bites
  • Cataracts
  • Cobalamin Malabsorbtion
  • Collie Eye Anomaly
  • Color, dilute
  • Color, excess white
  • Color, yellow
  • Distichiasis
  • Epilepsy
  • Elbow Dysplasia/Osteochondritis Desicans
  • Hip Dysplasia
  • Hemangiosarcoma
  • Heart Vessel Defects
  • Hernia
  • Iris Coloboma
  • Juvenile Renal Dysplasia
  • Lymphoma
  • Missing Teeth
  • MDR1
  • Neuronal Ceroid Lipofuscinosis
  • Patellar Luxation
  • Pelger-Huet Anomaly
  • Persistent Pupilary Membrane
  • Progressive Retinal Atrophy
  • Retained Testicles



SCORING SYSTEM - The analysis is based on two types of calculations, a risk score for each disease or disallowed color, and a coefficient of inbreeding (COI).

Trait scores are calculated through the fifth generation behind the subject dog. The lowest possible score for any single trait will be zero, which will be noted on the certificate "no known background". The highest possible score is 100.

SCORES ARE NOT A PROBABILITY PREDICTION! They are based on a modified percentage of ancestry calculation, indicating the amount of background for a trait in the pedigree. They provide a consistent method by which you can compare pedigrees. We scan each pedigree for dogs connected to a specific trait, noting whether those dogs are affected or the parents or grandparents of an affected dog. Parents are given half the weight of an affected and grandparents a quarter. We also note in which generation these dogs appear. Each generation farther behind the subject dog is given half the weight of the one before it.

Examples: If an affected dog is a parent of the dog being analyzed, the score would be 100 (the maximum). If the affected dog is a grandparent the score would be 50, a great grandparent 25, and so on. If the parent of the dog being analyzed was also a parent of an affected dog the score would be 50, 25 if it was a grandparent, and so on.

A score of 100 for any dog is equivalent to having an affected parent, 50 to having a parent that has produced the trait, 25 a grandparent that has produced it, etc. However, in most cases the scores are a cumulative figure representing multiple progenitors connected to the trait. Ideally, you would like to see all individual trait scores under 25, but this is very rarely the case. We also offer provide a total score for each dog, which represents the sum of the individual trait scores. Average scores are available HERE.

The COI is a calculation of the level of inbreeding in an individual or cross. Ideally, this should be kept low, preferably below 10%; however this may be difficult in practice. If it is not possible to find an appropriate mate that will result in a low COI, you should avoid exceeding an average of the two parents' COI's. COIs for individual dogs can be found on the hrdndog.com website. The COI of a litter cannot be calculated from the COI's of the parents; it must be done individually. For more detailed information on what COI's are and how to use them click HERE.

BREEDING RECOMMENDATIONS - A score of 25 or higher is reason for concern. The higher the score is, the greater the level of concern about that trait. If you plan to breed the dog, select mates that will lower the score in their mutual pups. The litter's score would be roughly an average between those of the parents. Avoid crosses that score in excess of 50 for any serious disease. It is advisable to wait before breeding a dog which scores 40 or higher for conditions that may arise later in life (e.g. epilepsy, autoimmune disease, etc.) until they are around 4 years old. This way you can be reasonably sure the dog itself is not affected.

Given that the average score for some traits is 40 or above, if your dog exceeds the average, attempt to reduce the scores for puppies to below the average whenever possible. If multiple traits are a concern in any particular dog, you are unlikely to be able to reduce risk on all of them while still selecting for key desired traits. The higher risk traits should be prioritized based on their health impact.

Example
: If a dog has above average scores for epilepsy, hernia and excess white, first priority should be given to reducing epilepsy risk. Hernias are usually of only minor health concern and excess white is cosmetic, though disqualifying in the show ring.

For some traits there are DNA screening tests available. (See the ASHGI Health Screening Protocol.) If a dog scores 25 or more for a trait for which such a test is available, we strongly recommend that if you intend to breed the dog, you have the test done so you will know its genotype for that trait. If a dog has had one of these tests and does not carry the pertinent mutation, its score would be zero for that trait no matter what its pedigree is.

How to sign up for pedigree analysis

NOTE: This process is done entirely via e-mail and/or regular mail. You do not need to travel nor present your dog for the analysis to be done.

Until we are able to complete the computerization of this process, we can only accommodate 110 appointments in a year. Appointment requests will be accepted starting on December 1 of the prior year and scheduled, 10 per month, until the available slots are full. No individual may have more than one appointment per year, however, those who have appointments may submit as many pedigrees as they wish. Only the owner or co-owner of a dog may request analysis. It can take up to two months to receive results, though usually the analysis can be processed more quickly than that. Fees are payable at the time of appointment and before the analysis is done.

If you would like to set an appointment for pedigree analysis, please click HERE .



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